Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | 3975 RP4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1474624 bp
Thymine Count
1407491 bp
Guanine Count
1006342 bp
Cytosine Count
1101240 bp
Genome Length
4989697 bp
Protein-coding Genes
4567 genes
Non-Coding Genes
121 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type iv secretory system conjugative dna transfer family protein | M099_4276 | Not Available | Positive | 4609949 - 4611892 | 72952.2 |
| hypothetical protein | M099_4277 | Not Available | Positive | 4611911 - 4612339 | 15547.3 |
| toprim-like family protein | M099_4278 | Not Available | Positive | 4612443 - 4613456 | 39364.8 |
| hypothetical protein | M099_4279 | Not Available | Positive | 4613552 - 4614034 | 18682.2 |
| hypothetical protein | M099_4280 | Not Available | Negative | 4614091 - 4614894 | 30289.4 |
| hypothetical protein | M099_4281 | Not Available | Negative | 4615005 - 4615211 | 8000.36 |
| hypothetical protein | M099_4282 | Not Available | Negative | 4615426 - 4615560 | 4818.83 |
| hypothetical protein | M099_4283 | Not Available | Positive | 4615522 - 4615746 | 8546.4 |
| hypothetical protein | M099_4284 | Not Available | Positive | 4615964 - 4616098 | 4926.05 |
| single-stranded dna-binding family protein | M099_4285 | Not Available | Negative | 4616283 - 4616675 | 14552.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

