Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | 3975 RP4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1474624 bp
Thymine Count
1407491 bp
Guanine Count
1006342 bp
Cytosine Count
1101240 bp
Genome Length
4989697 bp
Protein-coding Genes
4567 genes
Non-Coding Genes
121 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | M099_4246 | Not Available | Negative | 4585415 - 4586383 | 37018.0 |
| relaxase/mobilization nuclease domain protein | M099_4247 | Not Available | Negative | 4586398 - 4587801 | 53944.4 |
| ribbon-helix-helix, copg family protein | M099_4248 | Not Available | Negative | 4587798 - 4588106 | 12072.9 |
| cobq/cobb/mind/para nucleotide binding domain protein | M099_4249 | Not Available | Positive | 4588739 - 4589434 | 26135.4 |
| putative translation initiation factor if-2 | M099_4250 | Not Available | Positive | 4589469 - 4589915 | 16742.9 |
| archaeal atpase family protein | M099_4251 | Not Available | Negative | 4590014 - 4591120 | 42264.9 |
| hypothetical protein | M099_4252 | Not Available | Positive | 4591097 - 4591351 | 9529.75 |
| hypothetical protein | M099_4253 | Not Available | Negative | 4592193 - 4592354 | 5812.85 |
| initiator replication family protein | M099_4254 | Not Available | Positive | 4592729 - 4594219 | 58155.2 |
| cyclic nucleotide-binding domain protein | M099_4255 | Not Available | Positive | 4594382 - 4594981 | 23887.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

