Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | 3975 RP4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1474624 bp
Thymine Count
1407491 bp
Guanine Count
1006342 bp
Cytosine Count
1101240 bp
Genome Length
4989697 bp
Protein-coding Genes
4567 genes
Non-Coding Genes
121 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| homeo-like domain protein | M099_4206 | Not Available | Negative | 4546650 - 4547687 | 40442.7 |
| hypothetical protein | M099_4207 | Not Available | Positive | 4547659 - 4548285 | 25043.6 |
| glycosyl transferases group 1 family protein | M099_4208 | Not Available | Positive | 4548285 - 4549394 | 42339.2 |
| polysaccharide pyruvyl transferase family protein | M099_4209 | Not Available | Positive | 4549468 - 4550460 | 37932.3 |
| transposase dde domain protein | M099_4210 | Not Available | Positive | 4550846 - 4552132 | 49642.2 |
| glycosyl transferases group 1 family protein | M099_4211 | Not Available | Positive | 4552510 - 4553247 | 28694.9 |
| glycosyl transferase wecb/taga/cpsf family protein | M099_4212 | Not Available | Positive | 4553279 - 4553992 | 27608.0 |
| hypothetical protein | M099_4213 | Not Available | Positive | 4554178 - 4554987 | 30158.7 |
| acyltransferase family protein | M099_4214 | Not Available | Negative | 4555094 - 4556254 | 44353.2 |
| peptidase m3 family protein | M099_4215 | Not Available | Negative | 4556435 - 4558540 | 79164.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

