Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | 3975 RP4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1474624 bp
Thymine Count
1407491 bp
Guanine Count
1006342 bp
Cytosine Count
1101240 bp
Genome Length
4989697 bp
Protein-coding Genes
4567 genes
Non-Coding Genes
121 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc transporter family protein | M099_0394 | Not Available | Positive | 422012 - 423664 | 61673.2 |
| hypothetical protein | M099_0395 | Not Available | Positive | 423705 - 424562 | 31533.5 |
| peptidase s24-like family protein | M099_0396 | Not Available | Positive | 424543 - 424998 | 17650.8 |
| hypothetical protein | M099_0397 | Not Available | Negative | 425026 - 426186 | 43609.9 |
| hypothetical protein | M099_0398 | Not Available | Positive | 426240 - 426776 | 20311.5 |
| putative kae1-associated kinase | M099_0399 | Not Available | Positive | 427005 - 429602 | 98793.4 |
| uracil-dna glycosylase | M099_0400 | Not Available | Negative | 429691 - 430353 | 24929.5 |
| aspartate--ammonia ligase | M099_0401 | Not Available | Negative | 430471 - 431511 | 39770.2 |
| Trna-arg | Not Available | Not Available | Positive | 431714 - 431788 | Not Available |
| tonb-linked outer membrane, susc/raga family protein | M099_0403 | Not Available | Positive | 432148 - 435372 | 119607.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

