Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | 3975 RP4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1474624 bp
Thymine Count
1407491 bp
Guanine Count
1006342 bp
Cytosine Count
1101240 bp
Genome Length
4989697 bp
Protein-coding Genes
4567 genes
Non-Coding Genes
121 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative membrane protein | M099_4166 | Not Available | Negative | 4501347 - 4501460 | 4086.12 |
| his kinase a domain protein | M099_4167 | Not Available | Positive | 4501610 - 4504747 | 119550.0 |
| hypothetical protein | M099_4168 | Not Available | Negative | 4504903 - 4505076 | 6509.75 |
| hypothetical protein | M099_4169 | Not Available | Negative | 4505210 - 4506550 | 49877.6 |
| glycosyl hydrolases 28 family protein | M099_4170 | Not Available | Negative | 4506559 - 4507890 | 49565.9 |
| bacterial alpha-l-rhamnosidase family protein | M099_4171 | Not Available | Negative | 4507957 - 4510713 | 104153.0 |
| bnr repeat-like domain protein | M099_4172 | Not Available | Negative | 4510765 - 4514076 | 126774.0 |
| putative l-lysine 2,3-aminomutase | M099_4173 | Not Available | Positive | 4514414 - 4516507 | 81200.2 |
| tonb dependent receptor family protein | M099_4174 | Not Available | Negative | 4516596 - 4518929 | 87167.7 |
| hypothetical protein | M099_4175 | Not Available | Negative | 4519061 - 4519174 | 4365.48 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

