Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | 3975 RP4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1474624 bp
Thymine Count
1407491 bp
Guanine Count
1006342 bp
Cytosine Count
1101240 bp
Genome Length
4989697 bp
Protein-coding Genes
4567 genes
Non-Coding Genes
121 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| transposase dde domain protein | M099_4146 | Not Available | Positive | 4478040 - 4479326 | 49642.2 |
| hypothetical protein | M099_4147 | Not Available | Negative | 4479378 - 4479499 | 4983.15 |
| hypothetical protein | M099_4148 | Not Available | Negative | 4479456 - 4479668 | 8351.98 |
| transposase dde domain protein | M099_4149 | Not Available | Positive | 4479749 - 4479982 | 8784.7 |
| cna b-type domain protein | M099_4150 | Not Available | Negative | 4480387 - 4483728 | 123040.0 |
| hypothetical protein | M099_4151 | Not Available | Negative | 4483926 - 4485284 | 53151.0 |
| heme abc exporter, atp-binding protein ccma | M099_4152 | Not Available | Negative | 4485785 - 4487443 | 62521.7 |
| major facilitator superfamily protein | M099_4153 | Not Available | Negative | 4487511 - 4488677 | 43903.9 |
| 3-methyl-2-oxobutanoate hydroxymethyltransferase | M099_4154 | Not Available | Negative | 4488692 - 4489513 | 29580.9 |
| had hydrolase, ia, variant 3 family protein | M099_4155 | Not Available | Negative | 4489566 - 4490216 | 24626.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

