Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | 3975 RP4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1474624 bp
Thymine Count
1407491 bp
Guanine Count
1006342 bp
Cytosine Count
1101240 bp
Genome Length
4989697 bp
Protein-coding Genes
4567 genes
Non-Coding Genes
121 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| transcriptional regulator padr-like family protein | M099_4126 | Not Available | Negative | 4457673 - 4457999 | 12456.0 |
| acetyltransferase family protein | M099_4127 | Not Available | Positive | 4458176 - 4458673 | 19247.4 |
| dna alkylation repair enzyme family protein | M099_4128 | Not Available | Positive | 4458694 - 4459410 | 28303.2 |
| hypothetical protein | M099_4129 | Not Available | Positive | 4459410 - 4459541 | 4905.92 |
| peptide-n-glycosidase f, c terminal family protein | M099_4130 | Not Available | Negative | 4459515 - 4460765 | 46696.9 |
| hypothetical protein | M099_4131 | Not Available | Negative | 4460885 - 4462402 | 56797.3 |
| rela/spot family protein | M099_4132 | Not Available | Positive | 4462546 - 4464759 | 84511.3 |
| prokaryotic diacylglycerol kinase family protein | M099_4133 | Not Available | Positive | 4464781 - 4465134 | 12967.2 |
| hypothetical protein | M099_4134 | Not Available | Positive | 4465229 - 4465642 | 14899.0 |
| calcineurin-like phosphoesterase family protein | M099_4135 | Not Available | Positive | 4465851 - 4466657 | 31228.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

