Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | 3975 RP4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1474624 bp
Thymine Count
1407491 bp
Guanine Count
1006342 bp
Cytosine Count
1101240 bp
Genome Length
4989697 bp
Protein-coding Genes
4567 genes
Non-Coding Genes
121 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| adenosylmethionine-8-amino-7-oxononanoate transaminase | M099_4116 | Not Available | Negative | 4446585 - 4447856 | 47742.2 |
| biotin synthase | M099_4117 | Not Available | Negative | 4447895 - 4448854 | 35544.0 |
| hypothetical protein | M099_4118 | Not Available | Negative | 4448867 - 4449166 | 11118.6 |
| hypothetical protein | M099_4119 | Not Available | Positive | 4449206 - 4449355 | 5824.15 |
| polysaccharide deacetylase family protein | M099_4120 | Not Available | Negative | 4449385 - 4450779 | 53209.7 |
| glycosyl transferases group 1 family protein | M099_4121 | Not Available | Negative | 4450798 - 4452063 | 47628.2 |
| glycogen debranching enzyme n terminal family protein | M099_4122 | Not Available | Negative | 4452078 - 4453880 | 69618.9 |
| rhomboid family protein | M099_4123 | Not Available | Positive | 4454226 - 4454864 | 24130.6 |
| carbamoyl-phosphate synthase l chain, atp binding domain protein | M099_4124 | Not Available | Negative | 4455347 - 4456516 | 42895.6 |
| pspc domain protein | M099_4125 | Not Available | Negative | 4456614 - 4457660 | 38246.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

