Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | 3975 RP4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1474624 bp
Thymine Count
1407491 bp
Guanine Count
1006342 bp
Cytosine Count
1101240 bp
Genome Length
4989697 bp
Protein-coding Genes
4567 genes
Non-Coding Genes
121 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| bacterial regulatory helix-turn-helix s, arac family protein | M099_0384 | Not Available | Positive | 417093 - 417896 | 31624.0 |
| Trna-pro | Not Available | Not Available | Positive | 417997 - 418074 | Not Available |
| transposase family protein | M099_0386 | Not Available | Negative | 418194 - 418478 | 11146.5 |
| hypothetical protein | M099_0387 | Not Available | Negative | 418737 - 418832 | 3541.3 |
| hypothetical protein | M099_0388 | Not Available | Negative | 418870 - 419241 | 14419.2 |
| putative upi000043effc-like cluster protein | M099_0389 | Not Available | Negative | 419326 - 419700 | 14698.8 |
| hypothetical protein | M099_0390 | Not Available | Negative | 419774 - 420304 | 20652.1 |
| hypothetical protein | M099_0391 | Not Available | Positive | 420408 - 420533 | 4511.61 |
| hypothetical protein | M099_0392 | Not Available | Positive | 420624 - 420893 | 10086.3 |
| hypothetical protein | M099_0393 | Not Available | Positive | 420898 - 422004 | 41868.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

