Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | 3975 RP4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1474624 bp
Thymine Count
1407491 bp
Guanine Count
1006342 bp
Cytosine Count
1101240 bp
Genome Length
4989697 bp
Protein-coding Genes
4567 genes
Non-Coding Genes
121 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative pectate lyase | M099_4045 | Not Available | Negative | 4362085 - 4363818 | 64367.8 |
| starch-binding associating with outer membrane family protein | M099_4046 | Not Available | Negative | 4363987 - 4365996 | 75993.3 |
| tonb-linked outer membrane, susc/raga family protein | M099_4047 | Not Available | Negative | 4366017 - 4369472 | 126230.0 |
| xylose isomerase-like tim barrel family protein | M099_4048 | Not Available | Negative | 4369502 - 4370386 | 33290.8 |
| response regulator | M099_4049 | Not Available | Negative | 4370552 - 4374955 | 168799.0 |
| glycosyl hydrolases family 2, sugar binding domain protein | M099_4050 | Not Available | Negative | 4375081 - 4377705 | 98317.5 |
| hypothetical protein | M099_4051 | Not Available | Positive | 4378158 - 4378301 | 5204.46 |
| hypothetical protein | M099_4052 | Not Available | Negative | 4378392 - 4378505 | 4205.29 |
| abi-like family protein | M099_4053 | Not Available | Positive | 4378968 - 4379930 | 37535.2 |
| hypothetical protein | M099_4054 | Not Available | Negative | 4380246 - 4381040 | 30727.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

