Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | 3975 RP4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1474624 bp
Thymine Count
1407491 bp
Guanine Count
1006342 bp
Cytosine Count
1101240 bp
Genome Length
4989697 bp
Protein-coding Genes
4567 genes
Non-Coding Genes
121 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| transposase, mutator family protein | M099_4015 | Not Available | Negative | 4319875 - 4321107 | 46997.8 |
| transposase family protein | M099_4016 | Not Available | Negative | 4321462 - 4321746 | 11146.3 |
| moba-like ntp transferase domain protein | M099_4017 | Not Available | Negative | 4321751 - 4322022 | 10565.8 |
| hypothetical protein | M099_4018 | Not Available | Negative | 4322044 - 4322400 | 14223.8 |
| hypothetical protein | M099_4019 | Not Available | Positive | 4322477 - 4322632 | 6071.69 |
| hypothetical protein | M099_4020 | Not Available | Negative | 4322640 - 4323284 | 25215.6 |
| phage integrase family protein | M099_4021 | Not Available | Negative | 4324092 - 4325294 | 46824.9 |
| abc transporter family protein | M099_4022 | Not Available | Negative | 4325378 - 4327243 | 72108.0 |
| hypothetical protein | M099_4023 | Not Available | Negative | 4327251 - 4328084 | 31633.2 |
| glyoxalase/bleomycin resistance /dioxygenase superfamily protein | M099_4024 | Not Available | Negative | 4328127 - 4328504 | 14724.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

