Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | 3975 RP4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1474624 bp
Thymine Count
1407491 bp
Guanine Count
1006342 bp
Cytosine Count
1101240 bp
Genome Length
4989697 bp
Protein-coding Genes
4567 genes
Non-Coding Genes
121 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glycoside hydrolase family 2 | M099_3995 | Not Available | Negative | 4292633 - 4295302 | 99134.7 |
| type i phosphodiesterase / nucleotide pyrophosphatase family protein | M099_3996 | Not Available | Negative | 4295502 - 4296896 | 51632.3 |
| wd40-like beta propeller repeat family protein | M099_3997 | Not Available | Negative | 4296910 - 4298235 | 49976.5 |
| hypothetical protein | M099_3998 | Not Available | Negative | 4298354 - 4298515 | 6340.71 |
| hypothetical protein | M099_3999 | Not Available | Positive | 4298728 - 4298877 | 5731.24 |
| putative lipoprotein | M099_4000 | Not Available | Negative | 4299188 - 4299838 | 24053.2 |
| hypothetical protein | M099_4001 | Not Available | Negative | 4299853 - 4301406 | 57189.1 |
| nigd-like family protein | M099_4002 | Not Available | Negative | 4302181 - 4302975 | 30395.8 |
| starch-binding associating with outer membrane family protein | M099_4003 | Not Available | Negative | 4303062 - 4304759 | 64106.2 |
| tonb-linked outer membrane, susc/raga family protein | M099_4004 | Not Available | Negative | 4304788 - 4307637 | 106740.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

