Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | 3975 RP4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1474624 bp
Thymine Count
1407491 bp
Guanine Count
1006342 bp
Cytosine Count
1101240 bp
Genome Length
4989697 bp
Protein-coding Genes
4567 genes
Non-Coding Genes
121 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | M099_0374 | Not Available | Negative | 406926 - 407108 | 6931.26 |
| viral (super1) rna helicase family protein | M099_0375 | Not Available | Negative | 407143 - 408561 | 53922.6 |
| hypothetical protein | M099_0376 | Not Available | Positive | 408659 - 409345 | 25516.8 |
| hypothetical protein | M099_0377 | Not Available | Positive | 409348 - 410172 | 32358.8 |
| conserved hypothetical 95 family protein | M099_0378 | Not Available | Positive | 410163 - 410723 | 21359.3 |
| cardiolipin synthase | M099_0379 | Not Available | Negative | 410692 - 412128 | 55394.1 |
| cna b-type domain protein | M099_0380 | Not Available | Negative | 412221 - 415118 | 108170.0 |
| putative membrane protein | M099_0381 | Not Available | Negative | 415199 - 415603 | 15580.9 |
| 3-dehydroquinate synthase | M099_0382 | Not Available | Positive | 415701 - 416762 | 39850.1 |
| hypothetical protein | M099_0383 | Not Available | Negative | 416987 - 417121 | 5024.94 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

