Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | 3975 RP4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1474624 bp
Thymine Count
1407491 bp
Guanine Count
1006342 bp
Cytosine Count
1101240 bp
Genome Length
4989697 bp
Protein-coding Genes
4567 genes
Non-Coding Genes
121 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc transporter family protein | M099_0019 | Not Available | Negative | 17043 - 19199 | 82119.7 |
| radical sam additional 4fe4s-binding spasm domain protein | M099_0020 | Not Available | Negative | 19235 - 20518 | 49717.8 |
| hypothetical protein | M099_0021 | Not Available | Negative | 20591 - 20815 | 7934.24 |
| 5s ribosomal rna | Not Available | Not Available | Positive | 20834 - 20941 | Not Available |
| hypothetical protein | M099_0022 | Not Available | Negative | 20875 - 22539 | 64791.4 |
| cna b-type domain protein | M099_0023 | Not Available | Negative | 22989 - 23276 | 10777.3 |
| 5s ribosomal rna | Not Available | Not Available | Positive | 23679 - 23786 | Not Available |
| transcriptional regulatory family protein | M099_0024 | Not Available | Negative | 23324 - 23992 | 24744.0 |
| hypothetical protein | M099_0025 | Not Available | Positive | 24355 - 24588 | 8130.79 |
| putative lipoprotein | M099_0026 | Not Available | Positive | 24703 - 25902 | 45436.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

