Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | 3975 RP4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1474624 bp
Thymine Count
1407491 bp
Guanine Count
1006342 bp
Cytosine Count
1101240 bp
Genome Length
4989697 bp
Protein-coding Genes
4567 genes
Non-Coding Genes
121 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| gscfa family protein | M099_3945 | Not Available | Negative | 4239807 - 4240793 | 38641.5 |
| 1-deoxy-d-xylulose-5-phosphate synthase | M099_3946 | Not Available | Positive | 4240886 - 4242784 | 70238.9 |
| nad(p)-binding family protein | M099_3947 | Not Available | Positive | 4242797 - 4244137 | 49307.5 |
| cation transport family protein | M099_3948 | Not Available | Positive | 4244137 - 4245591 | 53451.2 |
| nadh-ubiquinone/plastoquinone oxidoreductase, chain 3 family protein | M099_3949 | Not Available | Positive | 4246175 - 4246525 | 13099.5 |
| nadh-quinone oxidoreductase, b subunit | M099_3950 | Not Available | Positive | 4246516 - 4247112 | 22081.9 |
| respiratory-chain nadh dehydrogenase, 49 kd subunit | M099_3951 | Not Available | Positive | 4247109 - 4248668 | 59743.6 |
| nadh dehydrogenase family protein | M099_3952 | Not Available | Positive | 4248846 - 4249868 | 38125.1 |
| 4fe-4s binding domain protein | M099_3953 | Not Available | Positive | 4249868 - 4250332 | 17400.3 |
| nadh-ubiquinone/plastoquinone oxidoreductase chain 6 family protein | M099_3954 | Not Available | Positive | 4250329 - 4250832 | 18224.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

