Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | 3975 RP4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1474624 bp
Thymine Count
1407491 bp
Guanine Count
1006342 bp
Cytosine Count
1101240 bp
Genome Length
4989697 bp
Protein-coding Genes
4567 genes
Non-Coding Genes
121 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glycosyl hydrolases 43 family protein | M099_3935 | Not Available | Positive | 4226731 - 4226895 | 6050.15 |
| glycosyl hydrolases 43 family protein | M099_3936 | Not Available | Positive | 4226900 - 4228231 | 49675.2 |
| fic/doc family protein | M099_3937 | Not Available | Positive | 4228494 - 4229240 | 28326.2 |
| hypothetical protein | M099_3938 | Not Available | Negative | 4229358 - 4230053 | 26655.1 |
| glycosyl hydrolases 28 family protein | M099_3939 | Not Available | Positive | 4230266 - 4232050 | 66068.3 |
| glycosyl hydrolases family 2, sugar binding domain protein | M099_3940 | Not Available | Positive | 4232303 - 4235215 | 109734.0 |
| glycosyl hydrolases 28 family protein | M099_3941 | Not Available | Positive | 4235257 - 4236561 | 49160.9 |
| hypothetical protein | M099_3942 | Not Available | Negative | 4236619 - 4236732 | 4059.82 |
| hypothetical protein | M099_3943 | Not Available | Negative | 4236713 - 4237276 | 21541.2 |
| alanine racemase | M099_3944 | Not Available | Negative | 4237366 - 4239831 | 92758.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

