Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | 3975 RP4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1474624 bp
Thymine Count
1407491 bp
Guanine Count
1006342 bp
Cytosine Count
1101240 bp
Genome Length
4989697 bp
Protein-coding Genes
4567 genes
Non-Coding Genes
121 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pectinesterase family protein | M099_3905 | Not Available | Negative | 4185718 - 4186668 | 35858.5 |
| glycosyl hydrolase family 88 family protein | M099_3906 | Not Available | Negative | 4186683 - 4187912 | 47064.1 |
| pts system sugar-specific permease component family protein | M099_3907 | Not Available | Positive | 4188202 - 4189593 | 49974.0 |
| kdui/iolb family protein | M099_3908 | Not Available | Positive | 4189612 - 4190568 | 35966.2 |
| sugar (and other) transporter family protein | M099_3909 | Not Available | Positive | 4190788 - 4192263 | 54265.1 |
| aaa domain protein | M099_3910 | Not Available | Negative | 4192317 - 4195643 | 128276.0 |
| hypothetical protein | M099_3911 | Not Available | Negative | 4195665 - 4196405 | 27963.5 |
| hypothetical protein | M099_3912 | Not Available | Negative | 4196502 - 4197965 | 55688.0 |
| glycoside hydrolase family 43 | M099_3913 | Not Available | Negative | 4198035 - 4199039 | 38240.8 |
| lactaldehyde dehydrogenase | M099_3914 | Not Available | Negative | 4199225 - 4200646 | 51919.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

