Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | 3975 RP4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1474624 bp
Thymine Count
1407491 bp
Guanine Count
1006342 bp
Cytosine Count
1101240 bp
Genome Length
4989697 bp
Protein-coding Genes
4567 genes
Non-Coding Genes
121 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| starch-binding associating with outer membrane family protein | M099_3895 | Not Available | Negative | 4166295 - 4167983 | 64111.6 |
| tonb-linked outer membrane, susc/raga family protein | M099_3896 | Not Available | Negative | 4168002 - 4171136 | 115973.0 |
| fecr family protein | M099_3897 | Not Available | Negative | 4171357 - 4172274 | 35339.9 |
| rna polymerase sigma-70 factor, expansion 1 family protein | M099_3898 | Not Available | Negative | 4172360 - 4172923 | 22518.2 |
| pectinesterase family protein | M099_3899 | Not Available | Negative | 4172988 - 4174508 | 55706.4 |
| hypothetical protein | M099_3900 | Not Available | Negative | 4174571 - 4177117 | 94970.7 |
| bnr/asp-box repeat family protein | M099_3901 | Not Available | Negative | 4177661 - 4179565 | 72011.2 |
| hypothetical protein | M099_3902 | Not Available | Negative | 4179576 - 4179734 | 6452.89 |
| starch-binding associating with outer membrane family protein | M099_3903 | Not Available | Negative | 4180029 - 4182194 | 79682.8 |
| tonb-linked outer membrane, susc/raga family protein | M099_3904 | Not Available | Negative | 4182227 - 4185499 | 118866.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

