Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | 3975 RP4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1474624 bp
Thymine Count
1407491 bp
Guanine Count
1006342 bp
Cytosine Count
1101240 bp
Genome Length
4989697 bp
Protein-coding Genes
4567 genes
Non-Coding Genes
121 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| outer membrane beta-barrel domain protein | M099_3885 | Not Available | Negative | 4144565 - 4145299 | 27039.4 |
| response regulator | M099_3886 | Not Available | Negative | 4145494 - 4149909 | 169862.0 |
| gdsl-like lipase/acylhydrolase family protein | M099_3887 | Not Available | Negative | 4150091 - 4151800 | 63351.6 |
| dienelactone hydrolase family protein | M099_3888 | Not Available | Negative | 4151825 - 4152985 | 43448.3 |
| prenyltransferase-like family protein | M099_3889 | Not Available | Negative | 4153006 - 4154619 | 61374.3 |
| cupin domain protein | M099_3890 | Not Available | Positive | 4154952 - 4155299 | 12765.5 |
| prolyl oligopeptidase family protein | M099_3891 | Not Available | Negative | 4155393 - 4157393 | 74894.4 |
| glycosyl hydrolases 31 family protein | M099_3892 | Not Available | Negative | 4157411 - 4159795 | 91820.7 |
| pa14 domain protein | M099_3893 | Not Available | Negative | 4159809 - 4163177 | 126868.0 |
| glycosyl hydrolases family 2, sugar binding domain protein | M099_3894 | Not Available | Negative | 4163180 - 4166209 | 114514.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

