Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | 3975 RP4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1474624 bp
Thymine Count
1407491 bp
Guanine Count
1006342 bp
Cytosine Count
1101240 bp
Genome Length
4989697 bp
Protein-coding Genes
4567 genes
Non-Coding Genes
121 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | M099_3865 | Not Available | Negative | 4121506 - 4122048 | 20854.9 |
| helix-turn-helix domain protein | M099_3866 | Not Available | Negative | 4122228 - 4122500 | 10453.7 |
| serine dehydrogenase ase family protein | M099_3867 | Not Available | Negative | 4122701 - 4123582 | 33481.2 |
| hypothetical protein | M099_3868 | Not Available | Negative | 4124212 - 4124334 | 4563.67 |
| hypothetical protein | M099_3869 | Not Available | Negative | 4124324 - 4124458 | 5224.58 |
| hypothetical protein | M099_3870 | Not Available | Positive | 4124717 - 4124833 | 4597.18 |
| cardiolipin synthase | M099_3871 | Not Available | Positive | 4124972 - 4126267 | 49710.2 |
| 5,10-methylenetetrahydrofolate reductase | M099_3872 | Not Available | Positive | 4126623 - 4127576 | 36181.4 |
| dna polymerase iii, delta subunit | M099_3873 | Not Available | Positive | 4127604 - 4128728 | 43533.9 |
| polymerase suppressor protein 1/psp1 family protein | M099_3874 | Not Available | Positive | 4128818 - 4130332 | 57743.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

