Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | 3975 RP4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1474624 bp
Thymine Count
1407491 bp
Guanine Count
1006342 bp
Cytosine Count
1101240 bp
Genome Length
4989697 bp
Protein-coding Genes
4567 genes
Non-Coding Genes
121 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative membrane protein | M099_3845 | Not Available | Negative | 4101777 - 4101911 | 5012.1 |
| hypothetical protein | M099_3846 | Not Available | Positive | 4102005 - 4102217 | 7868.19 |
| hypothetical protein | M099_3847 | Not Available | Negative | 4102237 - 4102398 | 5877.0 |
| hypothetical protein | M099_3848 | Not Available | Positive | 4102437 - 4102604 | 6427.87 |
| helix-turn-helix domain protein | M099_3849 | Not Available | Positive | 4102821 - 4103114 | 11542.9 |
| phage integrase family protein | M099_3850 | Not Available | Negative | 4103179 - 4104390 | 45959.5 |
| phage integrase family protein | M099_3851 | Not Available | Negative | 4104418 - 4105647 | 47625.1 |
| tyrosine type site-specific recombinase domain protein | M099_3852 | Not Available | Positive | 4105998 - 4106111 | 4410.53 |
| putative transcriptional regulator domain protein | M099_3853 | Not Available | Negative | 4106414 - 4106605 | 6987.42 |
| aaa atpase domain protein | M099_3854 | Not Available | Positive | 4106925 - 4108217 | 49350.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

