Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | 3975 RP4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1474624 bp
Thymine Count
1407491 bp
Guanine Count
1006342 bp
Cytosine Count
1101240 bp
Genome Length
4989697 bp
Protein-coding Genes
4567 genes
Non-Coding Genes
121 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | M099_3825 | Not Available | Positive | 4085876 - 4086013 | 5582.71 |
| hypothetical protein | M099_3826 | Not Available | Positive | 4086282 - 4086719 | 16683.4 |
| transposase dde domain protein | M099_3827 | Not Available | Positive | 4086755 - 4087141 | 15310.6 |
| hypothetical protein | M099_3828 | Not Available | Negative | 4087283 - 4087420 | 5228.19 |
| putative membrane protein | M099_3829 | Not Available | Positive | 4087539 - 4087673 | 5412.94 |
| hypothetical protein | M099_3830 | Not Available | Positive | 4087799 - 4087915 | 4418.44 |
| hypothetical protein | M099_3831 | Not Available | Positive | 4088404 - 4088562 | 5961.19 |
| ferritin-like domain protein | M099_3832 | Not Available | Positive | 4088722 - 4089174 | 17767.4 |
| marc integral membrane family protein | M099_3833 | Not Available | Positive | 4089277 - 4089924 | 23856.4 |
| ferritin | M099_3834 | Not Available | Positive | 4089975 - 4090457 | 18375.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

