Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | 3975 RP4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1474624 bp
Thymine Count
1407491 bp
Guanine Count
1006342 bp
Cytosine Count
1101240 bp
Genome Length
4989697 bp
Protein-coding Genes
4567 genes
Non-Coding Genes
121 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| toxin-antitoxin system, toxin component, rele family | M099_3805 | Not Available | Negative | 4068488 - 4068745 | 9296.32 |
| hypothetical protein | M099_3806 | Not Available | Negative | 4068975 - 4069094 | 4605.64 |
| undecaprenyl-phosphate glucose phosphotransferase | M099_3807 | Not Available | Positive | 4069153 - 4070556 | 54484.1 |
| polysaccharide biosynthesis/export family protein | M099_3808 | Not Available | Positive | 4070604 - 4071045 | 16296.9 |
| starch-binding associating with outer membrane family protein | M099_3809 | Not Available | Positive | 4071046 - 4072391 | 50468.0 |
| tonb-linked outer membrane, susc/raga family protein | M099_3810 | Not Available | Positive | 4072681 - 4075479 | 103763.0 |
| hypothetical protein | M099_3811 | Not Available | Positive | 4075581 - 4077122 | 58061.3 |
| haloacid dehalogenase-like hydrolase | M099_3812 | Not Available | Negative | 4077303 - 4077992 | 26982.9 |
| hypothetical protein | M099_3813 | Not Available | Negative | 4078068 - 4078916 | 31533.4 |
| ribosomal rna small subunit methyltransferase i | M099_3814 | Not Available | Negative | 4078945 - 4079619 | 24887.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

