Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | 3975 RP4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1474624 bp
Thymine Count
1407491 bp
Guanine Count
1006342 bp
Cytosine Count
1101240 bp
Genome Length
4989697 bp
Protein-coding Genes
4567 genes
Non-Coding Genes
121 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | M099_3795 | Not Available | Positive | 4061995 - 4062261 | 10279.1 |
| hypothetical protein | M099_3796 | Not Available | Positive | 4062266 - 4062445 | 6872.11 |
| hypothetical protein | M099_3797 | Not Available | Positive | 4062429 - 4062632 | 7733.45 |
| hypothetical protein | M099_3798 | Not Available | Negative | 4062768 - 4062980 | 7876.38 |
| hypothetical protein | M099_3799 | Not Available | Negative | 4063438 - 4065390 | 74107.6 |
| conserved protein found in conjugate transposon | M099_3800 | Not Available | Negative | 4065454 - 4065888 | 16485.4 |
| conjugative transposon trao family protein | M099_3801 | Not Available | Negative | 4065911 - 4066157 | 9064.85 |
| hypothetical protein | M099_3802 | Not Available | Positive | 4066158 - 4066508 | 13532.2 |
| transposase dde domain protein | M099_3803 | Not Available | Positive | 4066680 - 4067117 | 17265.8 |
| transposase dde domain protein | M099_3804 | Not Available | Positive | 4067462 - 4068354 | 34698.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

