Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | 3975 RP4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1474624 bp
Thymine Count
1407491 bp
Guanine Count
1006342 bp
Cytosine Count
1101240 bp
Genome Length
4989697 bp
Protein-coding Genes
4567 genes
Non-Coding Genes
121 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dimethyladenosine transferase | M099_0353 | Not Available | Positive | 384341 - 385183 | 31968.9 |
| magnesium transporter | M099_0354 | Not Available | Positive | 385215 - 386555 | 49694.8 |
| hypothetical protein | M099_0355 | Not Available | Positive | 386816 - 388624 | 70097.0 |
| Trna-gln | Not Available | Not Available | Positive | 388779 - 388849 | Not Available |
| oligomerization domain protein | M099_0358 | Not Available | Positive | 389169 - 389528 | 13409.9 |
| atp-dependent metallopeptidase hflb family protein | M099_0359 | Not Available | Positive | 389546 - 391552 | 74632.1 |
| cytidylyltransferase family protein | M099_0360 | Not Available | Positive | 391711 - 392550 | 30824.3 |
| hypothetical protein | M099_0361 | Not Available | Negative | 392542 - 392667 | 4538.48 |
| transposase dde domain protein | M099_0362 | Not Available | Negative | 392721 - 393626 | 35030.2 |
| nigd-like family protein | M099_0363 | Not Available | Negative | 393728 - 394315 | 22066.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

