Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | 3975 RP4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1474624 bp
Thymine Count
1407491 bp
Guanine Count
1006342 bp
Cytosine Count
1101240 bp
Genome Length
4989697 bp
Protein-coding Genes
4567 genes
Non-Coding Genes
121 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | M099_3765 | Not Available | Positive | 4042232 - 4042846 | 23914.2 |
| smi1 / knr4 family protein | M099_3766 | Not Available | Positive | 4042921 - 4043451 | 20235.4 |
| Trna-ala | Not Available | Not Available | Positive | 4043724 - 4043797 | Not Available |
| Trna-ile | Not Available | Not Available | Positive | 4043812 - 4043888 | Not Available |
| transposase family protein | M099_3769 | Not Available | Positive | 4043999 - 4044655 | 26053.5 |
| bacterial dnaa helix-turn-helix family protein | M099_3770 | Not Available | Positive | 4044941 - 4045234 | 11359.1 |
| hypothetical protein | M099_3771 | Not Available | Positive | 4045307 - 4046269 | 33285.4 |
| hypothetical protein | M099_3772 | Not Available | Positive | 4046535 - 4046702 | 6036.06 |
| hypothetical protein | M099_3773 | Not Available | Positive | 4046771 - 4047313 | 20055.4 |
| hypothetical protein | M099_3774 | Not Available | Positive | 4047316 - 4047609 | 11343.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

