Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | 3975 RP4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1474624 bp
Thymine Count
1407491 bp
Guanine Count
1006342 bp
Cytosine Count
1101240 bp
Genome Length
4989697 bp
Protein-coding Genes
4567 genes
Non-Coding Genes
121 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | M099_3755 | Not Available | Negative | 4037149 - 4037268 | 4462.5 |
| hypothetical protein | M099_3756 | Not Available | Positive | 4037279 - 4037488 | 7603.55 |
| hypothetical protein | M099_3757 | Not Available | Positive | 4037543 - 4037677 | 5090.53 |
| hypothetical protein | M099_3758 | Not Available | Positive | 4037813 - 4037998 | 7040.71 |
| hypothetical protein | M099_3759 | Not Available | Negative | 4037988 - 4038107 | 4593.7 |
| putative transposase | M099_3760 | Not Available | Positive | 4038267 - 4038449 | 7051.57 |
| putative transposase | M099_3761 | Not Available | Positive | 4038536 - 4039117 | 22403.7 |
| hypothetical protein | M099_3762 | Not Available | Positive | 4039452 - 4039718 | 9353.79 |
| tonb-linked outer membrane, susc/raga family protein | M099_3763 | Not Available | Positive | 4039804 - 4041765 | 72644.0 |
| initiator replication family protein | M099_3764 | Not Available | Positive | 4041768 - 4042200 | 16845.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

