Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | 3975 RP4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1474624 bp
Thymine Count
1407491 bp
Guanine Count
1006342 bp
Cytosine Count
1101240 bp
Genome Length
4989697 bp
Protein-coding Genes
4567 genes
Non-Coding Genes
121 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dead/deah box helicase family protein | M099_3745 | Not Available | Positive | 4021073 - 4023418 | 90134.1 |
| hypothetical protein | M099_3746 | Not Available | Positive | 4023424 - 4023642 | 8294.92 |
| aaa domain protein | M099_3747 | Not Available | Positive | 4023651 - 4025651 | 75797.8 |
| ftsk/spoiiie family protein | M099_3748 | Not Available | Positive | 4025690 - 4027243 | 58465.6 |
| kap family p-loop domain protein | M099_3749 | Not Available | Positive | 4027342 - 4029099 | 68666.8 |
| hypothetical protein | M099_3750 | Not Available | Positive | 4029168 - 4029854 | 25333.6 |
| hypothetical protein | M099_3751 | Not Available | Positive | 4029839 - 4031254 | 53845.6 |
| tatd related dnase family protein | M099_3752 | Not Available | Positive | 4031251 - 4031940 | 26529.4 |
| hypothetical protein | M099_3753 | Not Available | Negative | 4032050 - 4036000 | 152357.0 |
| metallo-beta-lactamase superfamily protein | M099_3754 | Not Available | Negative | 4035997 - 4037031 | 38812.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

