Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | 3975 RP4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1474624 bp
Thymine Count
1407491 bp
Guanine Count
1006342 bp
Cytosine Count
1101240 bp
Genome Length
4989697 bp
Protein-coding Genes
4567 genes
Non-Coding Genes
121 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| istb-like atp binding family protein | M099_3735 | Not Available | Negative | 4010917 - 4011183 | 10092.3 |
| transposase, mutator family protein | M099_3736 | Not Available | Positive | 4011262 - 4012494 | 47027.8 |
| hypothetical protein | M099_3737 | Not Available | Negative | 4012606 - 4015431 | 111238.0 |
| hypothetical protein | M099_3738 | Not Available | Negative | 4015718 - 4016083 | 13188.0 |
| hypothetical protein | M099_3739 | Not Available | Positive | 4016273 - 4016398 | 4910.89 |
| hypothetical protein | M099_3740 | Not Available | Positive | 4016467 - 4016658 | 7829.29 |
| hypothetical protein | M099_3741 | Not Available | Negative | 4016815 - 4017708 | 34555.5 |
| hypothetical protein | M099_3742 | Not Available | Positive | 4017884 - 4018126 | 9259.27 |
| dna methylase family protein | M099_3743 | Not Available | Positive | 4018141 - 4019994 | 70994.2 |
| virulence rhum family protein | M099_3744 | Not Available | Positive | 4019991 - 4021076 | 42258.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

