Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | 3975 RP4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1474624 bp
Thymine Count
1407491 bp
Guanine Count
1006342 bp
Cytosine Count
1101240 bp
Genome Length
4989697 bp
Protein-coding Genes
4567 genes
Non-Coding Genes
121 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | M099_3715 | Not Available | Negative | 3999386 - 4000108 | 27584.7 |
| putative membrane protein | M099_3716 | Not Available | Negative | 4000159 - 4000293 | 4924.17 |
| hypothetical protein | M099_3717 | Not Available | Positive | 4000482 - 4000922 | 16888.3 |
| hypothetical protein | M099_3718 | Not Available | Positive | 4001065 - 4001217 | 5922.48 |
| hypothetical protein | M099_3719 | Not Available | Positive | 4001588 - 4001725 | 5241.31 |
| type iv secretory system conjugative dna transfer family protein | M099_3720 | Not Available | Negative | 4002013 - 4002924 | 34142.6 |
| putative mobilization protein b | M099_3721 | Not Available | Negative | 4003656 - 4004369 | 27810.4 |
| mobilization b domain protein | M099_3722 | Not Available | Negative | 4004327 - 4004590 | 10271.7 |
| hypothetical protein | M099_3723 | Not Available | Negative | 4004654 - 4004950 | 11600.2 |
| hypothetical protein | M099_3724 | Not Available | Negative | 4004959 - 4005462 | 19049.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

