Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | 3975 RP4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1474624 bp
Thymine Count
1407491 bp
Guanine Count
1006342 bp
Cytosine Count
1101240 bp
Genome Length
4989697 bp
Protein-coding Genes
4567 genes
Non-Coding Genes
121 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| trna (5-methylaminomethyl-2-thiouridylate)-methyltransferase | M099_3685 | Not Available | Positive | 3976027 - 3977091 | 39768.7 |
| bacterial regulatory s, luxr family protein | M099_3686 | Not Available | Negative | 3977088 - 3977738 | 24599.1 |
| Trna-val | Not Available | Not Available | Positive | 3977807 - 3977884 | Not Available |
| hypothetical protein | M099_3688 | Not Available | Negative | 3977933 - 3978108 | 6266.39 |
| hypothetical protein | M099_3689 | Not Available | Negative | 3978128 - 3978263 | 5369.29 |
| homeo-like domain protein | M099_3690 | Not Available | Negative | 3978264 - 3978690 | 16757.4 |
| hypothetical protein | M099_3691 | Not Available | Negative | 3978786 - 3979385 | 22845.4 |
| hsp70 family protein | M099_3692 | Not Available | Positive | 3979483 - 3980126 | 22708.4 |
| phage integrase family protein | M099_3693 | Not Available | Positive | 3980353 - 3981288 | 36310.9 |
| transcription termination factor nusg family protein | M099_3694 | Not Available | Positive | 3981584 - 3982234 | 24605.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

