Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | 3975 RP4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1474624 bp
Thymine Count
1407491 bp
Guanine Count
1006342 bp
Cytosine Count
1101240 bp
Genome Length
4989697 bp
Protein-coding Genes
4567 genes
Non-Coding Genes
121 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | M099_0343 | Not Available | Negative | 372259 - 373335 | 39188.1 |
| hypothetical protein | M099_0344 | Not Available | Positive | 373466 - 373897 | 17033.8 |
| mg2 domain protein | M099_0345 | Not Available | Negative | 373958 - 379636 | 213522.0 |
| hypothetical protein | M099_0346 | Not Available | Negative | 379749 - 379934 | 7331.27 |
| transcriptional regulator, y4mf family protein | M099_0347 | Not Available | Negative | 380124 - 380339 | 7860.67 |
| hypothetical protein | M099_0348 | Not Available | Negative | 380585 - 380740 | 5656.94 |
| hypothetical protein | M099_0349 | Not Available | Negative | 380889 - 381149 | 9615.79 |
| cytidine and deoxycytidylate deaminase zinc-binding region family protein | M099_0350 | Not Available | Positive | 381252 - 381719 | 16967.2 |
| xaa-his dipeptidase family protein | M099_0351 | Not Available | Negative | 381781 - 383241 | 53097.4 |
| tigr00374 family protein | M099_0352 | Not Available | Negative | 383238 - 384089 | 31240.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

