Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | 3975 RP4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1474624 bp
Thymine Count
1407491 bp
Guanine Count
1006342 bp
Cytosine Count
1101240 bp
Genome Length
4989697 bp
Protein-coding Genes
4567 genes
Non-Coding Genes
121 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| initiator replication family protein | M099_3664 | Not Available | Positive | 3958883 - 3960040 | 45293.0 |
| bacterial mobilization family protein | M099_3665 | Not Available | Positive | 3961189 - 3961377 | 7452.2 |
| relaxase/mobilization nuclease domain protein | M099_3666 | Not Available | Positive | 3961810 - 3963372 | 60043.3 |
| cobq/cobb/mind/para nucleotide binding domain protein | M099_3667 | Not Available | Positive | 3963392 - 3964015 | 23398.3 |
| hypothetical protein | M099_3668 | Not Available | Positive | 3964074 - 3964508 | 16438.6 |
| hypothetical protein | M099_3669 | Not Available | Positive | 3964762 - 3966120 | 53151.0 |
| hypothetical protein | M099_3670 | Not Available | Negative | 3966270 - 3967004 | 28440.3 |
| serine palmitoyltransferase | M099_3671 | Not Available | Negative | 3967007 - 3968242 | 45624.1 |
| hypothetical protein | M099_3672 | Not Available | Positive | 3968411 - 3969409 | 37421.1 |
| hypothetical protein | M099_3673 | Not Available | Positive | 3969621 - 3970943 | 49429.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

