Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | 3975 RP4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1474624 bp
Thymine Count
1407491 bp
Guanine Count
1006342 bp
Cytosine Count
1101240 bp
Genome Length
4989697 bp
Protein-coding Genes
4567 genes
Non-Coding Genes
121 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| radical sam superfamily protein | M099_3644 | Not Available | Positive | 3945476 - 3946549 | 41050.6 |
| acyltransferase family protein | M099_3645 | Not Available | Positive | 3947071 - 3947541 | 18092.8 |
| aaa domain protein | M099_3646 | Not Available | Positive | 3947750 - 3948970 | 46394.9 |
| rlob-like family protein | M099_3647 | Not Available | Positive | 3948998 - 3949609 | 23430.9 |
| glycosyl transferases group 1 family protein | M099_3648 | Not Available | Positive | 3949795 - 3950883 | 40917.7 |
| hypothetical protein | M099_3649 | Not Available | Positive | 3950895 - 3951704 | 30808.8 |
| helicase conserved c-terminal domain protein | M099_3650 | Not Available | Positive | 3951715 - 3953793 | 78452.0 |
| hypothetical protein | M099_3651 | Not Available | Negative | 3953875 - 3954106 | 8936.63 |
| methyltransferase domain protein | M099_3652 | Not Available | Positive | 3954134 - 3954517 | 14236.9 |
| putative six-hairpin glycosidase | M099_3653 | Not Available | Positive | 3954518 - 3954943 | 16469.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

