Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | 3975 RP4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1474624 bp
Thymine Count
1407491 bp
Guanine Count
1006342 bp
Cytosine Count
1101240 bp
Genome Length
4989697 bp
Protein-coding Genes
4567 genes
Non-Coding Genes
121 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative membrane protein | M099_3634 | Not Available | Negative | 3937374 - 3937493 | 4196.17 |
| hypothetical protein | M099_3635 | Not Available | Negative | 3937568 - 3938074 | 18460.0 |
| hypothetical protein | M099_3636 | Not Available | Negative | 3938361 - 3938567 | 7792.31 |
| virulence-associated e family protein | M099_3637 | Not Available | Negative | 3938747 - 3941011 | 86750.8 |
| hypothetical protein | M099_3638 | Not Available | Negative | 3941098 - 3941274 | 6820.47 |
| hypothetical protein | M099_3639 | Not Available | Positive | 3941296 - 3941586 | 11122.1 |
| hypothetical protein | M099_3640 | Not Available | Positive | 3941626 - 3941841 | 8273.14 |
| 4fe-4s binding domain protein | M099_3641 | Not Available | Positive | 3941863 - 3943053 | 45012.0 |
| polysaccharide pyruvyl transferase family protein | M099_3642 | Not Available | Positive | 3943073 - 3944179 | 42317.9 |
| glycosyl transferases group 1 family protein | M099_3643 | Not Available | Positive | 3944281 - 3945459 | 44771.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

