Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | 3975 RP4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1474624 bp
Thymine Count
1407491 bp
Guanine Count
1006342 bp
Cytosine Count
1101240 bp
Genome Length
4989697 bp
Protein-coding Genes
4567 genes
Non-Coding Genes
121 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | M099_3584 | Not Available | Negative | 3892613 - 3892753 | 5373.64 |
| transposase, mutator family protein | M099_3585 | Not Available | Negative | 3892797 - 3894029 | 46997.8 |
| transposase family protein | M099_3586 | Not Available | Negative | 3894088 - 3894859 | 30054.6 |
| putative transposase | M099_3587 | Not Available | Negative | 3894860 - 3895113 | 9849.03 |
| ribose-phosphate diphosphokinase family protein | M099_3588 | Not Available | Negative | 3895325 - 3896041 | 25941.6 |
| thiamine phosphate pyrophosphorylase | M099_3589 | Not Available | Negative | 3896428 - 3896919 | 18540.2 |
| hypothetical protein | M099_3590 | Not Available | Positive | 3897256 - 3897609 | 12947.3 |
| glutathionylspermidine synthase preatp-grasp family protein | M099_3591 | Not Available | Positive | 3897622 - 3898746 | 43061.5 |
| thif family protein | M099_3592 | Not Available | Negative | 3898859 - 3899551 | 25388.8 |
| thiazole biosynthesis protein thih | M099_3593 | Not Available | Negative | 3899630 - 3900760 | 43181.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

