Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | 3975 RP4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1474624 bp
Thymine Count
1407491 bp
Guanine Count
1006342 bp
Cytosine Count
1101240 bp
Genome Length
4989697 bp
Protein-coding Genes
4567 genes
Non-Coding Genes
121 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative membrane protein | M099_0333 | Not Available | Negative | 364172 - 364597 | 15261.0 |
| mota/tolq/exbb proton channel family protein | M099_0334 | Not Available | Negative | 364641 - 365414 | 27566.2 |
| Trna-ser | Not Available | Not Available | Positive | 365502 - 365589 | Not Available |
| hydrolase, tatd family protein | M099_0336 | Not Available | Negative | 365757 - 366530 | 29324.4 |
| polyprenyl synthetase family protein | M099_0337 | Not Available | Negative | 366532 - 367509 | 36812.8 |
| tonb family c-terminal domain protein | M099_0338 | Not Available | Negative | 367591 - 368274 | 25649.9 |
| cytidylate kinase | M099_0339 | Not Available | Positive | 368460 - 369149 | 25702.8 |
| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase | M099_0340 | Not Available | Positive | 369142 - 370008 | 32600.1 |
| 6-phosphofructokinase | M099_0341 | Not Available | Positive | 370090 - 371070 | 35428.5 |
| lao/ao transport system atpase | M099_0342 | Not Available | Negative | 371159 - 372256 | 40361.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

