Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | 3975 RP4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1474624 bp
Thymine Count
1407491 bp
Guanine Count
1006342 bp
Cytosine Count
1101240 bp
Genome Length
4989697 bp
Protein-coding Genes
4567 genes
Non-Coding Genes
121 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| phage integrase family protein | M099_3574 | Not Available | Negative | 3880772 - 3881932 | 44940.7 |
| tonb-linked outer membrane, susc/raga family protein | M099_3575 | Not Available | Positive | 3882537 - 3885488 | 109505.0 |
| starch-binding associating with outer membrane family protein | M099_3576 | Not Available | Positive | 3885512 - 3887098 | 58810.6 |
| gtp-binding protein hflx | M099_3577 | Not Available | Positive | 3887190 - 3888404 | 46047.9 |
| putative transposase | M099_3578 | Not Available | Negative | 3888405 - 3888658 | 9849.03 |
| asma-like family protein | M099_3579 | Not Available | Negative | 3888953 - 3890392 | 53385.4 |
| hypothetical protein | M099_3580 | Not Available | Negative | 3891407 - 3891673 | 9993.72 |
| hypothetical protein | M099_3581 | Not Available | Negative | 3891696 - 3891860 | 6222.65 |
| hypothetical protein | M099_3582 | Not Available | Positive | 3892047 - 3892161 | 4689.8 |
| hypothetical protein | M099_3583 | Not Available | Negative | 3892162 - 3892503 | 13614.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

