Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | 3975 RP4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1474624 bp
Thymine Count
1407491 bp
Guanine Count
1006342 bp
Cytosine Count
1101240 bp
Genome Length
4989697 bp
Protein-coding Genes
4567 genes
Non-Coding Genes
121 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | M099_3554 | Not Available | Positive | 3867041 - 3867301 | 9998.22 |
| aaa domain protein | M099_3555 | Not Available | Positive | 3867288 - 3868154 | 32734.6 |
| peptidase m23 family protein | M099_3556 | Not Available | Negative | 3868205 - 3868852 | 24396.3 |
| hypothetical protein | M099_3557 | Not Available | Positive | 3868911 - 3869630 | 27621.2 |
| hypothetical protein | M099_3558 | Not Available | Positive | 3869632 - 3871191 | 58810.3 |
| hypothetical protein | M099_3559 | Not Available | Positive | 3871196 - 3872305 | 42711.9 |
| bacterial ph domain protein | M099_3560 | Not Available | Positive | 3872302 - 3872805 | 20038.8 |
| hypothetical protein | M099_3561 | Not Available | Positive | 3872786 - 3873493 | 26493.7 |
| c-terminal repeat of topoisomerase family protein | M099_3562 | Not Available | Positive | 3873494 - 3874330 | 31725.2 |
| hypothetical protein | M099_3563 | Not Available | Positive | 3874327 - 3874680 | 13947.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

