Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | 3975 RP4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1474624 bp
Thymine Count
1407491 bp
Guanine Count
1006342 bp
Cytosine Count
1101240 bp
Genome Length
4989697 bp
Protein-coding Genes
4567 genes
Non-Coding Genes
121 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | M099_3544 | Not Available | Negative | 3861310 - 3861474 | 6464.1 |
| type iv secretory system conjugative dna transfer family protein | M099_3545 | Not Available | Negative | 3861525 - 3862228 | 26481.7 |
| hypothetical protein | M099_3546 | Not Available | Positive | 3862229 - 3862361 | 4882.85 |
| conjugative transposon tran protein | M099_3547 | Not Available | Positive | 3862363 - 3863202 | 32374.3 |
| hypothetical protein | M099_3548 | Not Available | Positive | 3863215 - 3863718 | 19161.0 |
| hypothetical protein | M099_3549 | Not Available | Positive | 3863721 - 3864380 | 23689.9 |
| ompa family protein | M099_3550 | Not Available | Positive | 3864383 - 3865024 | 23848.3 |
| putative membrane protein | M099_3551 | Not Available | Negative | 3865110 - 3865223 | 4694.86 |
| hypothetical protein | M099_3552 | Not Available | Positive | 3866094 - 3866543 | 17702.2 |
| hypothetical protein | M099_3553 | Not Available | Positive | 3866540 - 3867019 | 18186.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

