Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | 3975 RP4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1474624 bp
Thymine Count
1407491 bp
Guanine Count
1006342 bp
Cytosine Count
1101240 bp
Genome Length
4989697 bp
Protein-coding Genes
4567 genes
Non-Coding Genes
121 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type i restriction enzyme r family protein | M099_3524 | Not Available | Positive | 3846855 - 3847271 | 16457.4 |
| hypothetical protein | M099_3525 | Not Available | Negative | 3847490 - 3847678 | 7055.14 |
| type iii restriction enzyme, res subunit | M099_3526 | Not Available | Positive | 3847682 - 3848830 | 43879.3 |
| phage integrase family protein | M099_3527 | Not Available | Negative | 3849056 - 3850201 | 44045.7 |
| dna binding, excisionase family domain protein | M099_3528 | Not Available | Negative | 3850198 - 3850617 | 16223.1 |
| transposase family protein | M099_3529 | Not Available | Negative | 3850767 - 3851051 | 11037.2 |
| transposase family protein | M099_3530 | Not Available | Negative | 3851122 - 3851610 | 18535.3 |
| hypothetical protein | M099_3531 | Not Available | Negative | 3851621 - 3851977 | 14085.3 |
| hypothetical protein | M099_3532 | Not Available | Negative | 3852348 - 3852578 | 8868.52 |
| transposase, mutator family protein | M099_3533 | Not Available | Positive | 3852803 - 3854017 | 46323.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

