Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | 3975 RP4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1474624 bp
Thymine Count
1407491 bp
Guanine Count
1006342 bp
Cytosine Count
1101240 bp
Genome Length
4989697 bp
Protein-coding Genes
4567 genes
Non-Coding Genes
121 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | M099_3514 | Not Available | Negative | 3833837 - 3833950 | 4165.05 |
| tyrosine type site-specific recombinase domain protein | M099_3515 | Not Available | Negative | 3834069 - 3834293 | 9073.06 |
| tonb-dependent receptor plug domain protein | M099_3516 | Not Available | Positive | 3834898 - 3836115 | 43986.2 |
| gtp-binding protein hflx | M099_3517 | Not Available | Negative | 3836116 - 3837330 | 46047.9 |
| starch-binding associating with outer membrane family protein | M099_3518 | Not Available | Negative | 3837422 - 3839008 | 58810.6 |
| tonb-linked outer membrane, susc/raga family protein | M099_3519 | Not Available | Negative | 3839032 - 3841983 | 109505.0 |
| phage integrase family protein | M099_3520 | Not Available | Positive | 3842588 - 3843748 | 44940.7 |
| tonb-dependent receptor plug domain protein | M099_3521 | Not Available | Positive | 3844360 - 3845577 | 43986.2 |
| hypothetical protein | M099_3522 | Not Available | Positive | 3845938 - 3846124 | 6761.34 |
| hypothetical protein | M099_3523 | Not Available | Positive | 3846564 - 3846839 | 10491.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

