Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | 3975 RP4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1474624 bp
Thymine Count
1407491 bp
Guanine Count
1006342 bp
Cytosine Count
1101240 bp
Genome Length
4989697 bp
Protein-coding Genes
4567 genes
Non-Coding Genes
121 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | M099_3504 | Not Available | Positive | 3823350 - 3823514 | 6471.05 |
| peptidase m13 family protein | M099_3505 | Not Available | Negative | 3823504 - 3825516 | 74903.8 |
| heme abc exporter, atp-binding protein ccma | M099_3506 | Not Available | Negative | 3825566 - 3827509 | 73597.2 |
| hypothetical protein | M099_3507 | Not Available | Positive | 3827852 - 3828202 | 13836.2 |
| phage integrase family protein | M099_3508 | Not Available | Positive | 3828226 - 3828549 | 12239.9 |
| transposase domain protein | M099_3509 | Not Available | Negative | 3828976 - 3829687 | 27543.0 |
| phage integrase family protein | M099_3510 | Not Available | Negative | 3830302 - 3831462 | 44940.7 |
| tonb-dependent receptor plug domain protein | M099_3511 | Not Available | Positive | 3832067 - 3833284 | 44133.1 |
| hypothetical protein | M099_3512 | Not Available | Positive | 3833348 - 3833581 | 9181.95 |
| hypothetical protein | M099_3513 | Not Available | Positive | 3833682 - 3833795 | 4591.41 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

