Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | 3975 RP4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1474624 bp
Thymine Count
1407491 bp
Guanine Count
1006342 bp
Cytosine Count
1101240 bp
Genome Length
4989697 bp
Protein-coding Genes
4567 genes
Non-Coding Genes
121 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative zinc ribbon domain protein | M099_3484 | Not Available | Positive | 3808679 - 3809470 | 30517.8 |
| type i restriction enzyme r family protein | M099_3485 | Not Available | Negative | 3809571 - 3809948 | 14860.0 |
| putative amp nucleosidase | M099_3486 | Not Available | Positive | 3810078 - 3810854 | 29142.2 |
| dna polymerase iii, delta subunit | M099_3487 | Not Available | Positive | 3810866 - 3811882 | 38857.2 |
| hypothetical protein | M099_3488 | Not Available | Negative | 3812158 - 3812292 | 4952.25 |
| hypothetical protein | M099_3489 | Not Available | Positive | 3812360 - 3812500 | 5684.08 |
| putative bacteriophage ci repressor protein | M099_3490 | Not Available | Positive | 3813202 - 3813456 | 9932.48 |
| dihydroorotate dehydrogenase b (nad(+)), electron transfer subunit | M099_3491 | Not Available | Positive | 3813550 - 3814329 | 28483.2 |
| dihydroorotate dehydrogenase family domain protein | M099_3492 | Not Available | Positive | 3814317 - 3815228 | 32305.3 |
| hypothetical protein | M099_3493 | Not Available | Positive | 3815407 - 3815553 | 5886.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

