Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | 3975 RP4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1474624 bp
Thymine Count
1407491 bp
Guanine Count
1006342 bp
Cytosine Count
1101240 bp
Genome Length
4989697 bp
Protein-coding Genes
4567 genes
Non-Coding Genes
121 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| rna polymerase sigma factor, sigma-70 family protein | M099_0323 | Not Available | Positive | 356339 - 356887 | 21091.3 |
| hypothetical protein | M099_0324 | Not Available | Positive | 356871 - 357200 | 12355.1 |
| thymidylate synthase | M099_0325 | Not Available | Positive | 357282 - 358076 | 30479.3 |
| dihydrofolate reductase family protein | M099_0326 | Not Available | Positive | 358160 - 358654 | 18849.7 |
| asnc family protein | M099_0327 | Not Available | Negative | 358658 - 359134 | 17875.6 |
| hypothetical protein | M099_0328 | Not Available | Positive | 359262 - 360548 | 48361.9 |
| acetyltransferase family protein | M099_0329 | Not Available | Positive | 360583 - 361119 | 21182.4 |
| transposase dde domain protein | M099_0330 | Not Available | Negative | 361399 - 362910 | 59191.7 |
| biopolymer transport exbd/tolr family protein | M099_0331 | Not Available | Negative | 363074 - 363538 | 17906.9 |
| biopolymer transport exbd/tolr family protein | M099_0332 | Not Available | Negative | 363538 - 364128 | 22472.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

