Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | 3975 RP4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1474624 bp
Thymine Count
1407491 bp
Guanine Count
1006342 bp
Cytosine Count
1101240 bp
Genome Length
4989697 bp
Protein-coding Genes
4567 genes
Non-Coding Genes
121 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| membrane protein insertase, yidc/oxa1 family protein | M099_3444 | Not Available | Negative | 3764743 - 3766590 | 70275.1 |
| ctp synthase | M099_3445 | Not Available | Negative | 3766648 - 3768246 | 60081.3 |
| hypothetical protein | M099_3446 | Not Available | Positive | 3768456 - 3769850 | 53456.6 |
| udp-n-acetylglucosamine 2-epimerase family protein | M099_3447 | Not Available | Negative | 3769951 - 3771039 | 40251.0 |
| hypothetical protein | M099_3448 | Not Available | Positive | 3771123 - 3771737 | 22186.8 |
| rna polymerase sigma factor, sigma-70 family protein | M099_3449 | Not Available | Positive | 3771896 - 3772399 | 19667.6 |
| conserved carboxylase domain protein | M099_3450 | Not Available | Positive | 3772589 - 3774364 | 66738.8 |
| hypothetical protein | M099_3451 | Not Available | Positive | 3774490 - 3775374 | 33269.5 |
| monofunctional biosynthetic peptidoglycan transglycosylase | M099_3452 | Not Available | Negative | 3775346 - 3776068 | 27910.3 |
| glycine zipper family protein | M099_3453 | Not Available | Negative | 3776197 - 3776916 | 24484.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

