Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | 3975 RP4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1474624 bp
Thymine Count
1407491 bp
Guanine Count
1006342 bp
Cytosine Count
1101240 bp
Genome Length
4989697 bp
Protein-coding Genes
4567 genes
Non-Coding Genes
121 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| toprim domain protein | M099_3424 | Not Available | Positive | 3737642 - 3740413 | 105794.0 |
| dna primase domain protein | M099_3425 | Not Available | Positive | 3740428 - 3740934 | 19264.0 |
| aaa atpase domain protein | M099_3426 | Not Available | Positive | 3740963 - 3742318 | 52323.4 |
| rlob-like family protein | M099_3427 | Not Available | Positive | 3742353 - 3743399 | 39740.2 |
| putative transposase | M099_3428 | Not Available | Positive | 3743480 - 3743719 | 9253.88 |
| hypothetical protein | M099_3429 | Not Available | Positive | 3744051 - 3749054 | 189897.0 |
| viral (super1) rna helicase family protein | M099_3430 | Not Available | Positive | 3749054 - 3750871 | 68440.8 |
| hypothetical protein | M099_3431 | Not Available | Positive | 3750837 - 3751415 | 22384.2 |
| hypothetical protein | M099_3432 | Not Available | Negative | 3751533 - 3751664 | 5293.2 |
| hypothetical protein | M099_3433 | Not Available | Positive | 3751889 - 3752164 | 10942.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

