Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | 3975 RP4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1474624 bp
Thymine Count
1407491 bp
Guanine Count
1006342 bp
Cytosine Count
1101240 bp
Genome Length
4989697 bp
Protein-coding Genes
4567 genes
Non-Coding Genes
121 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| octaprenyl-diphosphate synthase | M099_3394 | Not Available | Negative | 3710136 - 3711110 | 36285.5 |
| dna polymerase i | M099_3395 | Not Available | Positive | 3711202 - 3714117 | 109307.0 |
| hypothetical protein | M099_3396 | Not Available | Positive | 3714188 - 3714400 | 8022.03 |
| hypothetical protein | M099_3397 | Not Available | Positive | 3714445 - 3714813 | 14303.1 |
| 50s ribosome-binding gtpase family protein | M099_3398 | Not Available | Positive | 3715015 - 3716118 | 40801.9 |
| 2-dehydropantoate 2-reductase family protein | M099_3399 | Not Available | Positive | 3716238 - 3717149 | 33017.2 |
| prolipoprotein diacylglyceryl transferase | M099_3400 | Not Available | Positive | 3717146 - 3717967 | 31477.1 |
| chloramphenicol acetyltransferase | M099_3401 | Not Available | Positive | 3717968 - 3718624 | 25304.1 |
| putative lipoprotein | M099_3402 | Not Available | Negative | 3718636 - 3718782 | 5724.19 |
| outer membrane beta-barrel domain protein | M099_3403 | Not Available | Negative | 3718860 - 3719558 | 25718.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

