Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | 3975 RP4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1474624 bp
Thymine Count
1407491 bp
Guanine Count
1006342 bp
Cytosine Count
1101240 bp
Genome Length
4989697 bp
Protein-coding Genes
4567 genes
Non-Coding Genes
121 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | M099_3364 | Not Available | Positive | 3676712 - 3676867 | 5789.63 |
| ribbon-helix-helix, copg family protein | M099_3365 | Not Available | Negative | 3677046 - 3677333 | 11234.5 |
| replication domain protein | M099_3366 | Not Available | Negative | 3677391 - 3677769 | 14550.3 |
| mbpb domain protein | M099_3367 | Not Available | Negative | 3678104 - 3678249 | 5135.09 |
| hypothetical protein | M099_3368 | Not Available | Negative | 3678246 - 3678359 | 4473.46 |
| hypothetical protein | M099_3369 | Not Available | Positive | 3678500 - 3679885 | 50583.2 |
| hypothetical protein | M099_3370 | Not Available | Positive | 3679916 - 3680692 | 29072.3 |
| transposase dde domain protein | M099_3371 | Not Available | Positive | 3681436 - 3682029 | 23337.8 |
| transposase dde domain protein | M099_3372 | Not Available | Positive | 3682020 - 3682328 | 11601.3 |
| type i phosphodiesterase / nucleotide pyrophosphatase family protein | M099_3373 | Not Available | Negative | 3682377 - 3683945 | 58038.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

