Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | 3975 RP4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1474624 bp
Thymine Count
1407491 bp
Guanine Count
1006342 bp
Cytosine Count
1101240 bp
Genome Length
4989697 bp
Protein-coding Genes
4567 genes
Non-Coding Genes
121 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| peroxiredoxin | M099_3354 | Not Available | Negative | 3665788 - 3666354 | 21111.1 |
| hypothetical protein | M099_3355 | Not Available | Negative | 3666622 - 3666735 | 4351.37 |
| cora-like mg2+ transporter family protein | M099_3356 | Not Available | Positive | 3666861 - 3667784 | 35626.5 |
| peptidase propeptide and ypeb domain protein | M099_3357 | Not Available | Negative | 3667878 - 3669011 | 42884.4 |
| hypothetical protein | M099_3358 | Not Available | Negative | 3669091 - 3670491 | 51082.5 |
| tonb-dependent receptor plug domain protein | M099_3359 | Not Available | Negative | 3670549 - 3672849 | 86518.3 |
| dna-3-methyladenine glycosylase i family protein | M099_3360 | Not Available | Positive | 3673160 - 3673738 | 22208.6 |
| hypothetical protein | M099_3361 | Not Available | Positive | 3673965 - 3674306 | 13614.4 |
| transposase family protein | M099_3362 | Not Available | Positive | 3674365 - 3675288 | 36058.8 |
| transposase, mutator family protein | M099_3363 | Not Available | Positive | 3675347 - 3676579 | 46997.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

